STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
resA_2Thiol-disulfide oxidoreductase ResA. (194 aa)    
Predicted Functional Partners:
AMO63258.1
Cytochrome C biogenesis protein transmembrane region.
 
  
 0.996
ccsA
Cytochrome c biogenesis protein CcsA.
 
  
 0.991
pspA_7
Phosphoserine phosphatase 1.
  
 
 0.991
hemL2
Glutamate-1-semialdehyde 2,1-aminomutase 2.
  
  
 0.982
ccs1
Cytochrome c biogenesis protein Ccs1.
 
  
 0.981
msrA
Peptide methionine sulfoxide reductase MsrA.
  
 0.942
ahpC
Alkyl hydroperoxide reductase subunit C.
  
 0.931
lpdA
NAD(P)H dehydrogenase (quinone).
 
 0.823
hemE
Uroporphyrinogen decarboxylase.
  
  
 0.815
lpdC
Dihydrolipoyl dehydrogenase.
 
 0.797
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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