Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMO61927.1 | ydfJ_2 | MPHLCCUG_03122 | MPHLCCUG_04662 | PAC2 family protein. | Membrane protein YdfJ. | 0.447 |
AMO63447.1 | purT | MPHLCCUG_04661 | MPHLCCUG_04660 | MarR family protein. | Phosphoribosylglycinamide formyltransferase 2. | 0.636 |
AMO63447.1 | ydfJ_2 | MPHLCCUG_04661 | MPHLCCUG_04662 | MarR family protein. | Membrane protein YdfJ. | 0.752 |
bmr3_1 | ydfJ_2 | MPHLCCUG_02417 | MPHLCCUG_04662 | Multidrug resistance protein 3. | Membrane protein YdfJ. | 0.420 |
phrA | ydfJ_2 | MPHLCCUG_02203 | MPHLCCUG_04662 | Deoxyribodipyrimidine photo-lyase. | Membrane protein YdfJ. | 0.461 |
purT | AMO63447.1 | MPHLCCUG_04660 | MPHLCCUG_04661 | Phosphoribosylglycinamide formyltransferase 2. | MarR family protein. | 0.636 |
purT | ydfJ_2 | MPHLCCUG_04660 | MPHLCCUG_04662 | Phosphoribosylglycinamide formyltransferase 2. | Membrane protein YdfJ. | 0.487 |
ydfJ_2 | AMO61927.1 | MPHLCCUG_04662 | MPHLCCUG_03122 | Membrane protein YdfJ. | PAC2 family protein. | 0.447 |
ydfJ_2 | AMO63447.1 | MPHLCCUG_04662 | MPHLCCUG_04661 | Membrane protein YdfJ. | MarR family protein. | 0.752 |
ydfJ_2 | bmr3_1 | MPHLCCUG_04662 | MPHLCCUG_02417 | Membrane protein YdfJ. | Multidrug resistance protein 3. | 0.420 |
ydfJ_2 | phrA | MPHLCCUG_04662 | MPHLCCUG_02203 | Membrane protein YdfJ. | Deoxyribodipyrimidine photo-lyase. | 0.461 |
ydfJ_2 | purT | MPHLCCUG_04662 | MPHLCCUG_04660 | Membrane protein YdfJ. | Phosphoribosylglycinamide formyltransferase 2. | 0.487 |