STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acxAAcetone carboxylase beta subunit. (679 aa)    
Predicted Functional Partners:
apc4
Acetophenone carboxylase delta subunit.
 0.999
kstR2_10
HTH-type transcriptional repressor KstR2.
     
 0.778
kdd
L-erythro-3,5-diaminohexanoate dehydrogenase.
       0.777
lptB_2
Lipopolysaccharide export system ATP-binding protein LptB.
       0.749
AMO63475.1
Leucine/isoleucine/valine transporter permease subunit.
       0.747
livH_3
High-affinity branched-chain amino acid transport system permease protein LivH.
       0.747
livF_3
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
       0.747
AMO63479.1
Leu/Ile/Val-binding protein homolog 3 precursor.
       0.708
kce_2
3-keto-5-aminohexanoate cleavage enzyme.
       0.697
kal
3-aminobutyryl-CoA ammonia lyase.
       0.686
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.