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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO63506.1Hypothetical protein; Mycothiol maleylpyruvate isomerase N-terminal domain. (247 aa)    
Predicted Functional Partners:
AMO59756.1
Helix-turn-helix protein.
   
 0.919
rmlA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
     
 0.881
eryF
6-deoxyerythronolide B hydroxylase.
       0.633
AMO63508.1
Hypothetical protein.
 
     0.570
AMO62329.1
PemK-like protein.
 
  
 0.533
AMO58937.1
Polyketide cyclase / dehydrase and lipid transport.
  
   
 0.531
AMO59871.1
Helix-turn-helix protein.
 
 
 0.504
AMO63776.1
Helix-turn-helix protein.
 
 
 0.497
ywqF_1
UDP-glucose 6-dehydrogenase YwqF.
     
 0.487
AMO63770.1
Hypothetical protein.
 
     0.464
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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