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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO63511.1Hypothetical protein. (102 aa)    
Predicted Functional Partners:
AMO63512.1
Acetyltransferase (GNAT) family protein.
 
 
   0.967
AMO59965.1
Hypothetical protein.
  
     0.560
AMO63513.1
Hypothetical protein.
       0.494
mshD_1
Mycothiol acetyltransferase.
   
 
 0.438
ectA
L-2,4-diaminobutyric acid acetyltransferase.
   
 
 0.438
yncA
N-acyltransferase YncA.
   
 
 0.438
cphA
Cyanophycin synthetase.
   
 
 0.438
paiA
Protease synthase and sporulation negative regulatory protein PAI 1.
   
 
 0.438
AMO62106.1
Hypothetical protein.
   
 
 0.438
AMO62330.1
Acetyltransferase (GNAT) family protein.
   
 
 0.438
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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