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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO63607.1Hypothetical protein. (370 aa)    
Predicted Functional Partners:
AMO63609.1
Hypothetical protein.
     
 0.759
yhfQ
Putative ABC transporter substrate-binding lipoprotein YhfQ precursor.
       0.745
AMO59549.1
Hypothetical protein.
      
 0.533
fabG_20
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
       0.498
ethR_7
HTH-type transcriptional regulator EthR.
       0.494
kipI
Kinase A inhibitor.
       0.462
kipA
KipI antagonist.
       0.461
rhaS_3
HTH-type transcriptional activator RhaS.
 
     0.407
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
  
  
 0.400
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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