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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nirDNitrite reductase (NADH) small subunit. (114 aa)    
Predicted Functional Partners:
nasD
Nitrite reductase (NAD(P)H).
 
 0.999
narK
Nitrate/nitrite transporter NarK.
 
 
 0.974
narY
Respiratory nitrate reductase 2 beta chain.
  
 
 0.969
narG
Nitrate reductase alpha subunit.
  
 
 0.954
narX_2
Nitrate reductase-like protein NarX.
  
 
 0.953
narK2
Putative nitrate/nitrite transporter NarK2.
 
 
 0.942
amdA
Acetamidase.
  
  
  0.917
gdh
NAD-specific glutamate dehydrogenase.
     
 0.904
AMO62948.1
Nitronate monooxygenase.
    
  0.901
gdhA
NAD(P)-specific glutamate dehydrogenase.
    
 0.901
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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