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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsaB_2Flavin-dependent monooxygenase, reductase subunit HsaB. (162 aa)    
Predicted Functional Partners:
hsaC_1
Iron-dependent extradiol dioxygenase.
  
  
 0.624
AMO63633.1
Hypothetical protein.
       0.548
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
  
 0.529
efe
2-oxoglutarate-dependent ethylene/succinate-forming enzyme.
  
    0.485
ssuD_2
Alkanesulfonate monooxygenase.
  
  
 0.443
msuD_2
Methanesulfonate monooxygenase.
  
  
 0.443
ssuA_4
Putative aliphatic sulfonates-binding protein precursor.
 
    0.443
ntaA_5
Nitrilotriacetate monooxygenase component A.
 
  
 0.430
ntaA_4
Nitrilotriacetate monooxygenase component A.
 
  
 0.412
AMO63966.1
Phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase.
 
  
 0.404
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
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