Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMO59795.1 | AMO62673.1 | MPHLCCUG_00964 | MPHLCCUG_03881 | 5-formyltetrahydrofolate cyclo-ligase family protein. | Rhomboid family protein. | 0.513 |
AMO59795.1 | gluP | MPHLCCUG_00964 | MPHLCCUG_04983 | 5-formyltetrahydrofolate cyclo-ligase family protein. | Rhomboid protease GluP. | 0.513 |
AMO62673.1 | AMO59795.1 | MPHLCCUG_03881 | MPHLCCUG_00964 | Rhomboid family protein. | 5-formyltetrahydrofolate cyclo-ligase family protein. | 0.513 |
AMO62673.1 | ftsH | MPHLCCUG_03881 | MPHLCCUG_00438 | Rhomboid family protein. | ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.698 |
AMO62673.1 | gluP | MPHLCCUG_03881 | MPHLCCUG_04983 | Rhomboid family protein. | Rhomboid protease GluP. | 0.800 |
AMO62673.1 | hflK | MPHLCCUG_03881 | MPHLCCUG_02858 | Rhomboid family protein. | Modulator of FtsH protease HflK. | 0.812 |
AMO62673.1 | oatA_1 | MPHLCCUG_03881 | MPHLCCUG_00930 | Rhomboid family protein. | O-acetyltransferase OatA. | 0.795 |
AMO62673.1 | tatA | MPHLCCUG_03881 | MPHLCCUG_02712 | Rhomboid family protein. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.484 |
AMO63766.1 | gluP | MPHLCCUG_04981 | MPHLCCUG_04983 | Hypothetical protein. | Rhomboid protease GluP. | 0.709 |
AMO63766.1 | nlhH_11 | MPHLCCUG_04981 | MPHLCCUG_04982 | Hypothetical protein. | Carboxylesterase NlhH. | 0.718 |
fosB | gluP | MPHLCCUG_04767 | MPHLCCUG_04983 | Metallothiol transferase FosB. | Rhomboid protease GluP. | 0.610 |
fosB | oatA_1 | MPHLCCUG_04767 | MPHLCCUG_00930 | Metallothiol transferase FosB. | O-acetyltransferase OatA. | 0.547 |
ftsH | AMO62673.1 | MPHLCCUG_00438 | MPHLCCUG_03881 | ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | Rhomboid family protein. | 0.698 |
ftsH | gluP | MPHLCCUG_00438 | MPHLCCUG_04983 | ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | Rhomboid protease GluP. | 0.698 |
ftsH | hflK | MPHLCCUG_00438 | MPHLCCUG_02858 | ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | Modulator of FtsH protease HflK. | 0.981 |
ftsH | tatA | MPHLCCUG_00438 | MPHLCCUG_02712 | ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.423 |
gluP | AMO59795.1 | MPHLCCUG_04983 | MPHLCCUG_00964 | Rhomboid protease GluP. | 5-formyltetrahydrofolate cyclo-ligase family protein. | 0.513 |
gluP | AMO62673.1 | MPHLCCUG_04983 | MPHLCCUG_03881 | Rhomboid protease GluP. | Rhomboid family protein. | 0.800 |
gluP | AMO63766.1 | MPHLCCUG_04983 | MPHLCCUG_04981 | Rhomboid protease GluP. | Hypothetical protein. | 0.709 |
gluP | fosB | MPHLCCUG_04983 | MPHLCCUG_04767 | Rhomboid protease GluP. | Metallothiol transferase FosB. | 0.610 |
page 1 of 2