STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO63827.1DNA-binding transcriptional repressor AcrR. (203 aa)    
Predicted Functional Partners:
AMO63829.1
Hypothetical protein.
 
     0.879
AMO63828.1
Hypothetical protein.
 
     0.878
AMO62576.1
Hypothetical protein.
  
     0.754
yvdT
Putative HTH-type transcriptional regulator YvdT.
  
     0.754
AMO60726.1
Amidohydrolase.
 
     0.731
AMO62530.1
Alpha/beta hydrolase family protein.
  
     0.722
AMO62495.1
Amidohydrolase.
 
     0.700
vgb_2
Virginiamycin B lyase.
 
     0.684
AMO62523.1
Amidohydrolase.
 
     0.676
mhpC_1
2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase.
 
    0.641
Your Current Organism:
Mycolicibacterium phlei
NCBI taxonomy Id: 1771
Other names: ATCC 11758, Bacterium phlei, CCUG 21000, CIP 105389, DSM 43239, JCM 5865, JCM 6385, M. phlei, Mycobacterium phlei, NCTC 8151, NRRL B-14615, Sclerothrix phlei
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.