STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DL546_001108Uncharacterized protein. (267 aa)    
Predicted Functional Partners:
DL546_001613
Uncharacterized protein.
    
 0.529
RPN11
Multicatalytic endopeptidase.
    
  0.461
EAF3
Esa1p-associated factor.
    
  0.453
DL546_001602
WSC domain-containing protein.
    
  0.445
DL546_000783
Uncharacterized protein.
    
  0.445
DL546_006595
WSC domain-containing protein.
    
  0.445
SCON3
E3 ubiquitin ligase complex SCF subunit scon-3; Belongs to the SKP1 family.
    
  0.437
DL546_007555
Uncharacterized protein.
    
  0.437
TFC4
Transcription factor TFIIIC subunit tfc4.
    
  0.433
SUMO3
Small ubiquitin-related modifier 3.
    
  0.426
Your Current Organism:
Coniochaeta pulveracea
NCBI taxonomy Id: 177199
Other names: C. pulveracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.