STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BUD16Putative pyridoxal kinase. (354 aa)    
Predicted Functional Partners:
DL546_005367
Uncharacterized protein.
    
 0.899
DL546_007239
Uncharacterized protein.
    
 0.884
DL546_002961
4-nitrophenylphosphatase.
    
 0.876
SCON3
E3 ubiquitin ligase complex SCF subunit scon-3; Belongs to the SKP1 family.
    
 
 0.872
SNZ1
Pyridoxal 5'-phosphate synthase subunit snz1; Belongs to the PdxS/SNZ family.
   
 0.843
DL546_004534
Pyridox_oxase_2 domain-containing protein.
     
 0.837
DL546_002359
Uncharacterized protein.
     
 0.807
DL546_003180
Pyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'- phosphate (PLP), the active form of vitamin B6; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
  
  
 0.801
DL546_000201
YjeF N-terminal domain-containing protein.
     
 0.800
EDC3
Enhancer of mRNA decapping.
     
 0.800
Your Current Organism:
Coniochaeta pulveracea
NCBI taxonomy Id: 177199
Other names: C. pulveracea
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