STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DL546_004030Uncharacterized protein. (139 aa)    
Predicted Functional Partners:
SLU7
mRNA splicing protein.
   
 0.986
CWC22
Pre-mRNA-splicing factor cwc22.
    
  0.985
DL546_004460
Sde2_N_Ubi domain-containing protein.
    
 0.925
DL546_007815
Uncharacterized protein.
    
 0.922
DL546_004602
WD_REPEATS_REGION domain-containing protein.
    
 0.911
MSP4
Pre-mRNA-splicing factor syf2.
   
 0.907
PRP8
Pre-mRNA-splicing factor 8.
    
   0.885
CYP1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.859
DL546_004544
RRM domain-containing protein.
    
  0.802
DL546_003332
Uncharacterized protein.
   
 
 0.797
Your Current Organism:
Coniochaeta pulveracea
NCBI taxonomy Id: 177199
Other names: C. pulveracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.