STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DL546_003003Uncharacterized protein. (363 aa)    
Predicted Functional Partners:
DL546_003395
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.794
DL546_009027
Uncharacterized protein.
    
  0.615
MRP4
37S ribosomal protein, mitochondrial.
   
  0.614
MRPS16
37S ribosomal protein S16, mitochondrial.
   
  0.613
DL546_004522
Uncharacterized protein.
    
  0.613
DL546_006018
Uncharacterized protein.
   
  0.613
MRPS9
37S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
    
  0.612
DL546_008339
Uncharacterized protein.
    
  0.612
RSM23
37S ribosomal protein S23 mitochondrial.
    
  0.611
MSW1_1
Tryptophan--tRNA ligase, mitochondrial, variant 3.
    
  0.611
Your Current Organism:
Coniochaeta pulveracea
NCBI taxonomy Id: 177199
Other names: C. pulveracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.