STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DL546_004732Uncharacterized protein. (615 aa)    
Predicted Functional Partners:
DL546_007813
RRM domain-containing protein.
  
 
 0.965
DL546_007493
Uncharacterized protein.
    
 
 0.963
DL546_005663
Importin N-terminal domain-containing protein.
    
 
 0.907
DL546_008466
RRM domain-containing protein.
  
 
0.865
DL546_009588
Uncharacterized protein.
   
 0.727
DL546_000738
Uncharacterized protein.
    
 0.690
DL546_001144
RRM domain-containing protein.
  
 
0.683
RMT1_1
Type I protein arginine N-methyltransferase Rmt1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 
 0.677
DL546_009767
RRM domain-containing protein.
    
 0.674
RNA14
mRNA 3'-end-processing protein rna14.
   
 
 0.666
Your Current Organism:
Coniochaeta pulveracea
NCBI taxonomy Id: 177199
Other names: C. pulveracea
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