STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DL546_006773CBM1 domain-containing protein. (342 aa)    
Predicted Functional Partners:
DL546_004629
Uncharacterized protein.
    
  0.716
DL546_001874
Uncharacterized protein.
    
   0.692
ASF1
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
    
 0.681
HIR1
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.625
DL546_001613
Uncharacterized protein.
    
 0.611
RPS28A
40S ribosomal protein S28.
   
   0.601
TEF3
Translational elongation factor EF-1 alpha.
    
   0.596
RPS15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.578
RPS14
Ribosomal protein S14, S11; Belongs to the universal ribosomal protein uS11 family.
   
   0.568
SEH1
Epoxide hydrolase, soluble (SEH); Belongs to the WD repeat SEC13 family.
    
  0.555
Your Current Organism:
Coniochaeta pulveracea
NCBI taxonomy Id: 177199
Other names: C. pulveracea
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