STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DL546_008327Rab-GAP TBC domain-containing protein. (397 aa)    
Predicted Functional Partners:
YPT1_2
GTP-binding protein of the rab.
    
 0.897
YPT1_1
GTP-binding protein of the rab.
    
 0.897
DL546_005029
Uncharacterized protein.
    
 0.841
DL546_002050
Uncharacterized protein.
    
 0.664
DL546_008264
Protein YIP.
 
      0.644
GYP1
GTPase-activating protein.
   
 
 0.532
DL546_005303
Rab-GAP TBC domain-containing protein.
    
 
 0.515
DL546_001928
Uncharacterized protein.
      
 0.489
GYP7
GTPase activating protein.
      
 0.489
NAR1
Cytosolic Fe-S cluster assembly factor nar1; Belongs to the NARF family.
   
  
 0.483
Your Current Organism:
Coniochaeta pulveracea
NCBI taxonomy Id: 177199
Other names: C. pulveracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.