STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DL546_008041Rab-GAP TBC domain-containing protein. (1054 aa)    
Predicted Functional Partners:
RAB11B
Ras-related protein Rab-11B.
    
 0.921
DL546_002050
Uncharacterized protein.
    
 0.825
SEC4
GTP-binding protein.
    
 0.760
NCA2
Nuclear control of ATPase protein 2.
    
 0.760
DL546_000331
Zn(2)-C6 fungal-type domain-containing protein.
    
  0.488
DL546_005154
Zn(2)-C6 fungal-type domain-containing protein.
    
  0.488
DL546_004092
Fungal_trans domain-containing protein.
    
  0.488
ATG8
Autophagy-related protein.
    
  0.488
DL546_008243
Uncharacterized protein.
    
  0.488
DL546_007682
Uncharacterized protein.
   
 
  0.482
Your Current Organism:
Coniochaeta pulveracea
NCBI taxonomy Id: 177199
Other names: C. pulveracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.