STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBC11Ubc11 protein; Belongs to the ubiquitin-conjugating enzyme family. (175 aa)    
Predicted Functional Partners:
CDC16
Anaphase promoting complex subunit cdc16.
   
 0.998
DL546_002271
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.998
CDC27
Anaphase-promoting complex subunit cdc27.
    
 0.998
DL546_003712
Uncharacterized protein.
    
 0.998
APC5
Anaphase promoting complex subunit 5.
    
 0.997
DOC1
Anaphase promoting complex subunit doc1.
   
 0.997
CDC23
Anaphase-promoting complex subunit 23.
    
 0.997
APC1
Anaphase-promoting complex subunit 1.
    
 0.996
APC11
Ubiquitin-protein ligase Anaphase Promoting Complex.
   
 0.969
DL546_003025
Uncharacterized protein.
   
 0.969
Your Current Organism:
Coniochaeta pulveracea
NCBI taxonomy Id: 177199
Other names: C. pulveracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.