KUI05835.1 protein (Mycobacterium sp. IS3022)

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protein homology

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[Homology]

Score

KUI05835.1

RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)

Predicted Functional Partners:

KUI05834.1

0.974

rpoC

0.714

rpoB

0.713

rpoZ

0.707

rpoA

0.707

KUH92818.1

0.669

KUI04372.1

0.664

KUH93842.1

0.664

KUH95638.1

0.664

atpF-2

0.649

Your Current Organism:

Mycobacterium sp. IS3022

NCBI taxonomy Id: 1772277
Other names: M. sp. IS-3022, Mycobacterium sp. IS-3022

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KUH92818.1	KUI05835.1	AU188_13600	AU188_01680	Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.669
KUH93842.1	KUI05835.1	AU188_07385	AU188_01680	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
KUH95638.1	KUI05835.1	AU188_20125	AU188_01680	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
KUI04372.1	KUI05835.1	AU188_03470	AU188_01680	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
KUI05834.1	KUI05835.1	AU188_01675	AU188_01680	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
KUI05835.1	KUH92818.1	AU188_01680	AU188_13600	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.669
KUI05835.1	KUH93842.1	AU188_01680	AU188_07385	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
KUI05835.1	KUH95638.1	AU188_01680	AU188_20125	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
KUI05835.1	KUI04372.1	AU188_01680	AU188_03470	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
KUI05835.1	KUI05834.1	AU188_01680	AU188_01675	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
KUI05835.1	atpF-2	AU188_01680	AU188_04085	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP F0F1 synthase subunit delta; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family.	0.649
KUI05835.1	rpoA	AU188_01680	AU188_20000	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.707
KUI05835.1	rpoB	AU188_01680	AU188_20515	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.713
KUI05835.1	rpoC	AU188_01680	AU188_20510	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.714
KUI05835.1	rpoZ	AU188_01680	AU188_11975	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.707
atpF-2	KUI05835.1	AU188_04085	AU188_01680	ATP F0F1 synthase subunit delta; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family.	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.649
atpF-2	rpoA	AU188_04085	AU188_20000	ATP F0F1 synthase subunit delta; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.979
atpF-2	rpoB	AU188_04085	AU188_20515	ATP F0F1 synthase subunit delta; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.991
atpF-2	rpoC	AU188_04085	AU188_20510	ATP F0F1 synthase subunit delta; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.933
atpF-2	rpoZ	AU188_04085	AU188_11975	ATP F0F1 synthase subunit delta; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.567