KUI38068.1 protein (Mycobacterium sp. GA2829)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

KUI38068.1

Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)

Predicted Functional Partners:

KUI38124.1

0.984

KUI38063.1

0.981

KUI33464.1

0.970

KUI38067.1

0.968

KUI38069.1

0.968

KUI38064.1

0.967

KUI38065.1

0.966

KUI29023.1

0.940

KUI36645.1

0.930

KUI29024.1

0.925

Your Current Organism:

Mycobacterium sp. GA2829

NCBI taxonomy Id: 1772283
Other names: M. sp. GA-2829, Mycobacterium sp. GA-2829

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KUI29023.1	KUI29024.1	AU194_03220	AU194_03225	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.948
KUI29023.1	KUI33464.1	AU194_03220	AU194_29460	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
KUI29023.1	KUI36645.1	AU194_03220	AU194_22275	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.548
KUI29023.1	KUI38063.1	AU194_03220	AU194_16575	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.783
KUI29023.1	KUI38064.1	AU194_03220	AU194_16580	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	MCE-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.936
KUI29023.1	KUI38065.1	AU194_03220	AU194_16585	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937
KUI29023.1	KUI38067.1	AU194_03220	AU194_16595	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.938
KUI29023.1	KUI38068.1	AU194_03220	AU194_16600	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.940
KUI29023.1	KUI38069.1	AU194_03220	AU194_16605	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Virulence factor Mce; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.966
KUI29024.1	KUI29023.1	AU194_03225	AU194_03220	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.948
KUI29024.1	KUI33464.1	AU194_03225	AU194_29460	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
KUI29024.1	KUI36645.1	AU194_03225	AU194_22275	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.790
KUI29024.1	KUI38064.1	AU194_03225	AU194_16580	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	MCE-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.928
KUI29024.1	KUI38065.1	AU194_03225	AU194_16585	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
KUI29024.1	KUI38067.1	AU194_03225	AU194_16595	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
KUI29024.1	KUI38068.1	AU194_03225	AU194_16600	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
KUI29024.1	KUI38069.1	AU194_03225	AU194_16605	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Virulence factor Mce; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931
KUI29024.1	KUI38124.1	AU194_03225	AU194_16570	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.783
KUI33464.1	KUI29023.1	AU194_29460	AU194_03220	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
KUI33464.1	KUI29024.1	AU194_29460	AU194_03225	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994