STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUI29456.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)    
Predicted Functional Partners:
uvrB
Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
       0.849
KUI30369.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.625
KUI33083.1
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
   
  
 0.622
KUI32452.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.599
KUI25716.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.584
KUI28560.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.576
KUI29459.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.526
KUI27842.1
Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.506
KUI27281.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.500
KUI30143.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.463
Your Current Organism:
Mycobacterium sp. IS1742
NCBI taxonomy Id: 1772285
Other names: M. sp. IS-1742, Mycobacterium sp. IS-1742
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