node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APU24259.1 | APU24707.1 | BBG46_00145 | BBG46_02735 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
APU24259.1 | rplA | BBG46_00145 | BBG46_03490 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.941 |
APU24259.1 | rplC | BBG46_00145 | BBG46_03810 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.999 |
APU24259.1 | rplI | BBG46_00145 | BBG46_00415 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.999 |
APU24259.1 | rplJ | BBG46_00145 | BBG46_03540 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sugar kinase; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.923 |
APU24259.1 | rplK | BBG46_00145 | BBG46_03485 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.941 |
APU24259.1 | rpmG2 | BBG46_00145 | BBG46_03450 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family. | 0.999 |
APU24259.1 | rpsF | BBG46_00145 | BBG46_00400 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
APU24259.1 | rpsL | BBG46_00145 | BBG46_03700 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
APU24259.1 | rpsR | BBG46_00145 | BBG46_00410 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.999 |
APU24707.1 | APU24259.1 | BBG46_02735 | BBG46_00145 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
APU24707.1 | rplC | BBG46_02735 | BBG46_03810 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.999 |
APU24707.1 | rplI | BBG46_02735 | BBG46_00415 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.999 |
APU24707.1 | rplJ | BBG46_02735 | BBG46_03540 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sugar kinase; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |
APU24707.1 | rplK | BBG46_02735 | BBG46_03485 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
APU24707.1 | rpmG2 | BBG46_02735 | BBG46_03450 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family. | 0.999 |
APU24707.1 | rpsF | BBG46_02735 | BBG46_00400 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
APU24707.1 | rpsL | BBG46_02735 | BBG46_03700 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
APU24707.1 | rpsR | BBG46_02735 | BBG46_00410 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.999 |
rplA | APU24259.1 | BBG46_03490 | BBG46_00145 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.941 |