node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APU24895.1 | APU24896.1 | BBG46_03835 | BBG46_03840 | 50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
APU24895.1 | hpf | BBG46_03835 | BBG46_16905 | 50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.889 |
APU24895.1 | rplO | BBG46_03835 | BBG46_03920 | 50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
APU24895.1 | rplU | BBG46_03835 | BBG46_12795 | 50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.999 |
APU24895.1 | rpmA | BBG46_03835 | BBG46_12790 | 50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family. | 0.999 |
APU24895.1 | rpmC | BBG46_03835 | BBG46_03850 | 50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
APU24895.1 | rpsD | BBG46_03835 | BBG46_18020 | 50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
APU24895.1 | rpsF | BBG46_03835 | BBG46_00400 | 50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
APU24895.1 | rpsI | BBG46_03835 | BBG46_17945 | 50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
APU24895.1 | rpsM | BBG46_03835 | BBG46_18030 | 50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.999 |
APU24896.1 | APU24895.1 | BBG46_03840 | BBG46_03835 | 30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
APU24896.1 | hpf | BBG46_03840 | BBG46_16905 | 30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.999 |
APU24896.1 | rplO | BBG46_03840 | BBG46_03920 | 30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
APU24896.1 | rplU | BBG46_03840 | BBG46_12795 | 30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.999 |
APU24896.1 | rpmA | BBG46_03840 | BBG46_12790 | 30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family. | 0.999 |
APU24896.1 | rpmC | BBG46_03840 | BBG46_03850 | 30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
APU24896.1 | rpsD | BBG46_03840 | BBG46_18020 | 30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
APU24896.1 | rpsF | BBG46_03840 | BBG46_00400 | 30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
APU24896.1 | rpsI | BBG46_03840 | BBG46_17945 | 30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
APU24896.1 | rpsM | BBG46_03840 | BBG46_18030 | 30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.999 |