STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_0673Two component sensor kinase HK1. (168 aa)    
Predicted Functional Partners:
RN08_0675
Two component DNA binding transcriptional regulator TcrA.
 
 0.952
RN08_1005
Two component transcriptional regulator PrrA.
 
 0.905
RN08_3582
Two component DNA-binding response regulator MtrA.
 
 0.905
RN08_0546
Two component sensory transduction protein RegX.
 
 0.904
RN08_1094
Two-component response regulator MrpA.
 
 0.902
RN08_1162
Two component transcriptional regulator TrcR.
 
 0.902
RN08_0846
Two component system response transcriptional positive regulator PhoP.
 
 0.901
RN08_4151
Two component transcriptional regulator TcrX.
 
 0.898
RN08_1151
Transcriptional regulator KdpE.
 
 0.891
RN08_3178
Transcriptional regulator.
 
 0.885
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.