Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RN08_0118 | RN08_1713 | Peptide synthetase Nrp. | Polyketide synthase; Overlaps another CDS with the same product name. | 0.990 |
RN08_0118 | RN08_1714 | Peptide synthetase Nrp. | Polyketide synthase; Overlaps another CDS with the same product name. | 0.990 |
RN08_0118 | RN08_1716 | Peptide synthetase Nrp. | fatty-acid--CoA ligase FadD24. | 0.830 |
RN08_0118 | RN08_1841 | Peptide synthetase Nrp. | Polyketide synthase. | 0.993 |
RN08_0118 | RN08_2637 | Peptide synthetase Nrp. | Peptide synthetase; Overlaps another CDS with the same product name. | 0.542 |
RN08_0118 | RN08_2639 | Peptide synthetase Nrp. | Peptide synthetase; Overlaps another CDS with the same product name. | 0.535 |
RN08_0118 | RN08_3230 | Peptide synthetase Nrp. | Phthiocerol synthesis polyketide synthase type I PpsB. | 0.982 |
RN08_0118 | RN08_3231 | Peptide synthetase Nrp. | Phthiocerol synthesis polyketide synthase type I PpsC; Overlaps another CDS with the same product name. | 0.999 |
RN08_0118 | RN08_3233 | Peptide synthetase Nrp. | Phthiocerol synthesis polyketide synthase type I PpsD. | 0.999 |
RN08_0118 | RN08_4194 | Peptide synthetase Nrp. | Polyketide synthase; Overlaps another CDS with the same product name. | 0.997 |
RN08_1713 | RN08_0118 | Polyketide synthase; Overlaps another CDS with the same product name. | Peptide synthetase Nrp. | 0.990 |
RN08_1713 | RN08_1714 | Polyketide synthase; Overlaps another CDS with the same product name. | Polyketide synthase; Overlaps another CDS with the same product name. | 0.999 |
RN08_1713 | RN08_1716 | Polyketide synthase; Overlaps another CDS with the same product name. | fatty-acid--CoA ligase FadD24. | 0.850 |
RN08_1713 | RN08_1841 | Polyketide synthase; Overlaps another CDS with the same product name. | Polyketide synthase. | 0.999 |
RN08_1713 | RN08_2637 | Polyketide synthase; Overlaps another CDS with the same product name. | Peptide synthetase; Overlaps another CDS with the same product name. | 0.947 |
RN08_1713 | RN08_2639 | Polyketide synthase; Overlaps another CDS with the same product name. | Peptide synthetase; Overlaps another CDS with the same product name. | 0.949 |
RN08_1713 | RN08_3230 | Polyketide synthase; Overlaps another CDS with the same product name. | Phthiocerol synthesis polyketide synthase type I PpsB. | 0.998 |
RN08_1713 | RN08_3231 | Polyketide synthase; Overlaps another CDS with the same product name. | Phthiocerol synthesis polyketide synthase type I PpsC; Overlaps another CDS with the same product name. | 0.999 |
RN08_1713 | RN08_3233 | Polyketide synthase; Overlaps another CDS with the same product name. | Phthiocerol synthesis polyketide synthase type I PpsD. | 0.999 |
RN08_1713 | RN08_4194 | Polyketide synthase; Overlaps another CDS with the same product name. | Polyketide synthase; Overlaps another CDS with the same product name. | 0.999 |
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