Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RN08_0819 | RN08_0893 | Hypothetical protein. | succinyl-CoA transferase. | 0.531 |
RN08_0819 | RN08_1918 | Hypothetical protein. | Hypothetical protein. | 0.753 |
RN08_0819 | RN08_4161 | Hypothetical protein. | Hypothetical protein. | 0.615 |
RN08_0893 | RN08_0819 | succinyl-CoA transferase. | Hypothetical protein. | 0.531 |
RN08_0893 | RN08_1918 | succinyl-CoA transferase. | Hypothetical protein. | 0.451 |
RN08_1915 | RN08_1916 | Hypothetical protein. | Hypothetical protein. | 0.874 |
RN08_1915 | RN08_1917 | Hypothetical protein. | Oxidoreductase. | 0.596 |
RN08_1915 | RN08_1918 | Hypothetical protein. | Hypothetical protein. | 0.507 |
RN08_1916 | RN08_1915 | Hypothetical protein. | Hypothetical protein. | 0.874 |
RN08_1916 | RN08_1917 | Hypothetical protein. | Oxidoreductase. | 0.689 |
RN08_1916 | RN08_1918 | Hypothetical protein. | Hypothetical protein. | 0.507 |
RN08_1917 | RN08_1915 | Oxidoreductase. | Hypothetical protein. | 0.596 |
RN08_1917 | RN08_1916 | Oxidoreductase. | Hypothetical protein. | 0.689 |
RN08_1917 | RN08_1918 | Oxidoreductase. | Hypothetical protein. | 0.740 |
RN08_1918 | RN08_0819 | Hypothetical protein. | Hypothetical protein. | 0.753 |
RN08_1918 | RN08_0893 | Hypothetical protein. | succinyl-CoA transferase. | 0.451 |
RN08_1918 | RN08_1915 | Hypothetical protein. | Hypothetical protein. | 0.507 |
RN08_1918 | RN08_1916 | Hypothetical protein. | Hypothetical protein. | 0.507 |
RN08_1918 | RN08_1917 | Hypothetical protein. | Oxidoreductase. | 0.740 |
RN08_1918 | RN08_1976 | Hypothetical protein. | Hypothetical protein. | 0.497 |
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