Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RN08_0346 | RN08_0347 | PPE family protein PPE5. | PPE family protein PPE5. | 0.853 |
RN08_0346 | RN08_0386 | PPE family protein PPE5. | Isoniazid inducible protein IniB. | 0.774 |
RN08_0346 | RN08_0650 | PPE family protein PPE5. | Hypothetical protein. | 0.773 |
RN08_0346 | RN08_1943 | PPE family protein PPE5. | Integral membrane protein. | 0.699 |
RN08_0346 | RN08_2452 | PPE family protein PPE5. | Integral membrane protein. | 0.774 |
RN08_0346 | RN08_3755 | PPE family protein PPE5. | Hypothetical protein. | 0.772 |
RN08_0347 | RN08_0346 | PPE family protein PPE5. | PPE family protein PPE5. | 0.853 |
RN08_0347 | RN08_0386 | PPE family protein PPE5. | Isoniazid inducible protein IniB. | 0.774 |
RN08_0347 | RN08_0650 | PPE family protein PPE5. | Hypothetical protein. | 0.773 |
RN08_0347 | RN08_1943 | PPE family protein PPE5. | Integral membrane protein. | 0.694 |
RN08_0347 | RN08_2452 | PPE family protein PPE5. | Integral membrane protein. | 0.774 |
RN08_0347 | RN08_3755 | PPE family protein PPE5. | Hypothetical protein. | 0.772 |
RN08_0386 | RN08_0346 | Isoniazid inducible protein IniB. | PPE family protein PPE5. | 0.774 |
RN08_0386 | RN08_0347 | Isoniazid inducible protein IniB. | PPE family protein PPE5. | 0.774 |
RN08_0386 | RN08_0399 | Isoniazid inducible protein IniB. | PPE family protein PPE8. | 0.774 |
RN08_0386 | RN08_0650 | Isoniazid inducible protein IniB. | Hypothetical protein. | 0.783 |
RN08_0386 | RN08_1943 | Isoniazid inducible protein IniB. | Integral membrane protein. | 0.662 |
RN08_0386 | RN08_2129 | Isoniazid inducible protein IniB. | PPE family protein PPE34. | 0.774 |
RN08_0386 | RN08_2452 | Isoniazid inducible protein IniB. | Integral membrane protein. | 0.781 |
RN08_0386 | RN08_3696 | Isoniazid inducible protein IniB. | PPE family protein PPE56; Overlaps another CDS with the same product name. | 0.774 |
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