Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RN08_0267 | RN08_1061 | Alpha-(1->3)-arabinofuranosyltransferase. | Integral membrane protein. | 0.758 |
RN08_0267 | RN08_1302 | Alpha-(1->3)-arabinofuranosyltransferase. | Alpha-1,2-mannosyltransferase; Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol pentamannoside mannosyltransferase. | 0.803 |
RN08_0267 | RN08_2068 | Alpha-(1->3)-arabinofuranosyltransferase. | Integral membrane protein. | 0.573 |
RN08_0267 | RN08_2636 | Alpha-(1->3)-arabinofuranosyltransferase. | L-lysine N6-monooxygenase. | 0.732 |
RN08_0267 | RN08_3983 | Alpha-(1->3)-arabinofuranosyltransferase. | Transmembrane protein. | 0.505 |
RN08_1061 | RN08_0267 | Integral membrane protein. | Alpha-(1->3)-arabinofuranosyltransferase. | 0.758 |
RN08_1061 | RN08_1302 | Integral membrane protein. | Alpha-1,2-mannosyltransferase; Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol pentamannoside mannosyltransferase. | 0.757 |
RN08_1061 | RN08_2068 | Integral membrane protein. | Integral membrane protein. | 0.673 |
RN08_1061 | RN08_2636 | Integral membrane protein. | L-lysine N6-monooxygenase. | 0.766 |
RN08_1061 | RN08_3983 | Integral membrane protein. | Transmembrane protein. | 0.768 |
RN08_1201 | RN08_2068 | Hypothetical protein. | Integral membrane protein. | 0.693 |
RN08_1302 | RN08_0267 | Alpha-1,2-mannosyltransferase; Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol pentamannoside mannosyltransferase. | Alpha-(1->3)-arabinofuranosyltransferase. | 0.803 |
RN08_1302 | RN08_1061 | Alpha-1,2-mannosyltransferase; Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol pentamannoside mannosyltransferase. | Integral membrane protein. | 0.757 |
RN08_1302 | RN08_2068 | Alpha-1,2-mannosyltransferase; Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol pentamannoside mannosyltransferase. | Integral membrane protein. | 0.618 |
RN08_1302 | RN08_2636 | Alpha-1,2-mannosyltransferase; Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol pentamannoside mannosyltransferase. | L-lysine N6-monooxygenase. | 0.695 |
RN08_1302 | RN08_3983 | Alpha-1,2-mannosyltransferase; Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol pentamannoside mannosyltransferase. | Transmembrane protein. | 0.761 |
RN08_1417 | RN08_1540 | Hypothetical protein. | Hypothetical protein. | 0.645 |
RN08_1417 | RN08_2068 | Hypothetical protein. | Integral membrane protein. | 0.633 |
RN08_1540 | RN08_1417 | Hypothetical protein. | Hypothetical protein. | 0.645 |
RN08_1540 | RN08_2068 | Hypothetical protein. | Integral membrane protein. | 0.614 |
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