Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RN08_0849 | RN08_2021 | Hypothetical protein. | Flavoprotein. | 0.945 |
RN08_0849 | RN08_3901 | Hypothetical protein. | 3-ketosteroid-9-alpha-hydroxylase oxygenase subunit. | 0.734 |
RN08_0849 | RN08_3913 | Hypothetical protein. | 3-oxosteroid 1-dehydrogenase. | 0.936 |
RN08_0849 | RN08_3945 | Hypothetical protein. | Extradiol dioxygenase. | 0.712 |
RN08_0849 | RN08_3947 | Hypothetical protein. | Flavin-dependent monooxygenase oxygenase subunit HsaA. | 0.624 |
RN08_1396 | RN08_2021 | Multifunctional 2-oxoglutarate dehydrogenase E1 component /2-oxoglutarate dehydrogenase dihydrolipoyllysine-residue succinyltransferase. | Flavoprotein. | 0.942 |
RN08_1396 | RN08_3659 | Multifunctional 2-oxoglutarate dehydrogenase E1 component /2-oxoglutarate dehydrogenase dihydrolipoyllysine-residue succinyltransferase. | Succinate dehydrogenase cytochrome B-556 subunit. | 0.958 |
RN08_1396 | RN08_3913 | Multifunctional 2-oxoglutarate dehydrogenase E1 component /2-oxoglutarate dehydrogenase dihydrolipoyllysine-residue succinyltransferase. | 3-oxosteroid 1-dehydrogenase. | 0.942 |
RN08_1396 | RN08_3914 | Multifunctional 2-oxoglutarate dehydrogenase E1 component /2-oxoglutarate dehydrogenase dihydrolipoyllysine-residue succinyltransferase. | Dehydrogenase. | 0.414 |
RN08_1396 | RN08_3947 | Multifunctional 2-oxoglutarate dehydrogenase E1 component /2-oxoglutarate dehydrogenase dihydrolipoyllysine-residue succinyltransferase. | Flavin-dependent monooxygenase oxygenase subunit HsaA. | 0.413 |
RN08_2021 | RN08_0849 | Flavoprotein. | Hypothetical protein. | 0.945 |
RN08_2021 | RN08_1396 | Flavoprotein. | Multifunctional 2-oxoglutarate dehydrogenase E1 component /2-oxoglutarate dehydrogenase dihydrolipoyllysine-residue succinyltransferase. | 0.942 |
RN08_2021 | RN08_3659 | Flavoprotein. | Succinate dehydrogenase cytochrome B-556 subunit. | 0.958 |
RN08_2021 | RN08_3901 | Flavoprotein. | 3-ketosteroid-9-alpha-hydroxylase oxygenase subunit. | 0.824 |
RN08_2021 | RN08_3913 | Flavoprotein. | 3-oxosteroid 1-dehydrogenase. | 0.937 |
RN08_2021 | RN08_3916 | Flavoprotein. | Lipid transfer protein. | 0.688 |
RN08_2021 | RN08_3945 | Flavoprotein. | Extradiol dioxygenase. | 0.832 |
RN08_2021 | RN08_3947 | Flavoprotein. | Flavin-dependent monooxygenase oxygenase subunit HsaA. | 0.747 |
RN08_2021 | RN08_3948 | Flavoprotein. | 3-ketosteroid-9-alpha-hydroxylase reductase subunit. | 0.680 |
RN08_3659 | RN08_1396 | Succinate dehydrogenase cytochrome B-556 subunit. | Multifunctional 2-oxoglutarate dehydrogenase E1 component /2-oxoglutarate dehydrogenase dihydrolipoyllysine-residue succinyltransferase. | 0.958 |
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