Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKC38375.13-(3-hydroxyphenyl)propionate hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)    
Predicted Functional Partners:
AKC38376.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.780
AKC38377.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.677
AKC38378.1
HD family phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.668
AKC39129.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.593
AKC37898.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.573
AKC37564.1
SAM-dependent methlyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.572
AKC37899.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.572
AKC39340.1
SAM-dependent methlyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.567
AKC41517.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.564
AKC38546.1
FAD-binding monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.540
Your Current Organism:
Mycobacteroides chelonae
NCBI taxonomy Id: 1774
Other names: ATCC 35752, CCUG 47445, CIP 104535, DSM 43804, IMET 10609, JCM 6388, M. chelonae, Mycobacterium chelonae, Mycobacterium chelonei, NCTC 946, strain CM 6388
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