STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKC38514.1Copper resistance protein CopD; Derived by automated computational analysis using gene prediction method: Protein Homology. (668 aa)    
Predicted Functional Partners:
AKC37349.1
Copper resistance protein CopC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.863
AKC37350.1
Nuclear export factor GLE1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.854
qcrC
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.716
AKC41616.1
Cytochrome C biogenesis protein ResB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.702
ctaA
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.701
AKC41281.1
Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.563
ctaD
Cytochrome C oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
  
 0.559
AKC38019.1
Cytochrome C oxidase subunit 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.558
AKC38779.1
Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.548
ctaE_1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.538
Your Current Organism:
Mycobacteroides chelonae
NCBI taxonomy Id: 1774
Other names: ATCC 35752, CCUG 47445, CIP 104535, DSM 43804, IMET 10609, JCM 6388, M. chelonae, Mycobacterium chelonae, Mycobacterium chelonei, NCTC 946, strain CM 6388
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.