STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKC38680.1Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)    
Predicted Functional Partners:
AKC38679.1
Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.942
AKC37524.1
Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
AKC40488.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.745
AKC40682.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.708
sodA
Superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
  
 0.688
AKC41610.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.688
AKC41214.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.668
AKC40904.1
Pyruvate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.666
AKC37550.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.664
AKC41071.1
beta-hydroxyacyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.664
Your Current Organism:
Mycobacteroides chelonae
NCBI taxonomy Id: 1774
Other names: ATCC 35752, CCUG 47445, CIP 104535, DSM 43804, IMET 10609, JCM 6388, M. chelonae, Mycobacterium chelonae, Mycobacterium chelonei, NCTC 946, strain CM 6388
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