STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKC39994.1Lipoprotein LpqB; Derived by automated computational analysis using gene prediction method: Protein Homology. (583 aa)    
Predicted Functional Partners:
mtrA
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.931
cpxA
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.912
AKC37404.1
Cutinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.754
AKC39470.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.750
AKC39260.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.749
AKC37595.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.748
AKC38310.1
Lipoprotein LprC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.735
AKC40564.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.721
AKC40550.1
Peptidase M50; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.720
AKC37412.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.715
Your Current Organism:
Mycobacteroides chelonae
NCBI taxonomy Id: 1774
Other names: ATCC 35752, CCUG 47445, CIP 104535, DSM 43804, IMET 10609, JCM 6388, M. chelonae, Mycobacterium chelonae, Mycobacterium chelonei, NCTC 946, strain CM 6388
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.