node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKC37674.1 | AKC38312.1 | GR01_02540 | GR01_06600 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA repair exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.687 |
AKC37674.1 | AKC41570.1 | GR01_02540 | GR01_18070 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.678 |
AKC37674.1 | AKC41571.1 | GR01_02540 | GR01_18075 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.671 |
AKC38312.1 | AKC37674.1 | GR01_06600 | GR01_02540 | DNA repair exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.687 |
AKC38312.1 | AKC41570.1 | GR01_06600 | GR01_18070 | DNA repair exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.840 |
AKC38312.1 | AKC41571.1 | GR01_06600 | GR01_18075 | DNA repair exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.678 |
AKC38312.1 | dnaN | GR01_06600 | GR01_00010 | DNA repair exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.601 |
AKC38312.1 | polA_2 | GR01_06600 | GR01_12120 | DNA repair exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.982 |
AKC38312.1 | recA | GR01_06600 | GR01_14580 | DNA repair exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.849 |
AKC38312.1 | uvrD | GR01_06600 | GR01_17080 | DNA repair exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.982 |
AKC41570.1 | AKC37674.1 | GR01_18070 | GR01_02540 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.678 |
AKC41570.1 | AKC38312.1 | GR01_18070 | GR01_06600 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA repair exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.840 |
AKC41570.1 | AKC41571.1 | GR01_18070 | GR01_18075 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
AKC41570.1 | dnaE_1 | GR01_18070 | GR01_18025 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.950 |
AKC41570.1 | dnaE_2 | GR01_18070 | GR01_12660 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.693 |
AKC41570.1 | dnaN | GR01_18070 | GR01_00010 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.891 |
AKC41570.1 | lexA | GR01_18070 | GR01_14455 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ArsR family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.773 |
AKC41570.1 | polA_2 | GR01_18070 | GR01_12120 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.735 |
AKC41570.1 | recA | GR01_18070 | GR01_14580 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.774 |
AKC41570.1 | uvrD | GR01_18070 | GR01_17080 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.727 |