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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKC40358.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (607 aa)    
Predicted Functional Partners:
eryA_3
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.972
AKC38922.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.972
AKC39609.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.972
AKC38848.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.906
AKC37406.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.877
AKC40360.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.864
AKC39777.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.839
AKC40364.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.780
AKC40359.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
AKC41517.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.744
Your Current Organism:
Mycobacteroides chelonae
NCBI taxonomy Id: 1774
Other names: ATCC 35752, CCUG 47445, CIP 104535, DSM 43804, IMET 10609, JCM 6388, M. chelonae, Mycobacterium chelonae, Mycobacterium chelonei, NCTC 946, strain CM 6388
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