Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKC40358.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (607 aa)    
Predicted Functional Partners:
eryA_3
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.910
AKC38922.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.910
AKC39609.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.910
AKC40360.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.861
AKC40359.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.786
AKC40364.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.779
AKC39776.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.720
AKC38848.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.716
AKC37774.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.686
AKC37331.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.673
Your Current Organism:
Mycobacteroides chelonae
NCBI taxonomy Id: 1774
Other names: ATCC 35752, CCUG 47445, CIP 104535, DSM 43804, IMET 10609, JCM 6388, M. chelonae, Mycobacterium chelonae, Mycobacterium chelonei, NCTC 946, strain CM 6388
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