STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW95622.1Hypothetical protein. (226 aa)    
Predicted Functional Partners:
SCW95625.1
Terminase-like family protein.
       0.773
SCW95629.1
Hypothetical protein.
       0.590
SCW95595.1
Hypothetical protein.
       0.466
SCW95602.1
Hypothetical protein.
       0.466
SCW95607.1
Protein of unknown function.
       0.466
SCW95611.1
Hypothetical protein.
       0.466
SCW95616.1
Hypothetical protein.
       0.466
SCW95619.1
Hypothetical protein.
       0.466
SCW95584.1
ParB/RepB/Spo0J family partition protein.
       0.458
SCW95589.1
ParB-like nuclease domain-containing protein.
       0.458
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.