STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW96634.1Spermidine/putrescine transport system substrate-binding protein. (375 aa)    
Predicted Functional Partners:
SCW96636.1
Spermidine/putrescine transport system permease protein.
 
 
  0.990
SCW96637.1
Spermidine/putrescine transport system permease protein.
 
  0.990
SCW93460.1
Spermidine/putrescine transport system permease protein.
 
 
  0.885
SCW96635.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.868
SCW89325.1
Spermidine/putrescine transport system permease protein.
  
 
  0.838
SCW89317.1
Spermidine/putrescine transport system permease protein.
  
 
  0.836
SCW39253.1
Spermidine/putrescine transport system permease protein.
 
 
  0.752
SCW89309.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
  0.752
SCW39273.1
Spermidine/putrescine transport system permease protein.
 
 
  0.726
SCW44393.1
Spermidine/putrescine transport system permease protein.
 
 
  0.707
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.