STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW29995.1Uncharacterised nucleotidyltransferase. (397 aa)    
Predicted Functional Partners:
SCW46634.1
Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster.
 
 0.998
SCW94845.1
Capsular exopolysaccharide family.
 
 0.998
SCW29965.1
Hypothetical protein.
 
     0.831
SCW30011.1
ATP-binding cassette, subfamily C.
 
     0.831
SCW29937.1
Hypothetical protein.
 
     0.825
SCW29905.1
Hypothetical protein.
 
     0.816
SCW29919.1
Hypothetical protein.
 
     0.791
SCW78048.1
Transglutaminase-like superfamily protein.
 
     0.785
SCW45252.1
Hypothetical protein.
 
     0.782
SCW45233.1
Coenzyme PQQ synthesis protein D (PqqD).
 
     0.776
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.