STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW32930.1Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. (467 aa)    
Predicted Functional Partners:
SCW32947.1
Two-component system, OmpR family, phosphate regulon response regulator OmpR.
  0.996
SCW42086.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.985
SCW67831.1
PAS domain S-box-containing protein.
   
 0.975
SCW36030.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase).
   
 0.966
SCW40015.1
PAS domain S-box-containing protein.
 
 0.947
SCW73952.1
Signal transduction histidine kinase.
  
  
 
0.902
SCW85420.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.840
SCW91704.1
PAS domain S-box-containing protein.
   
 0.831
SCW59872.1
Na+/proline symporter.
 
 
 0.799
SCW93834.1
Amino acid adenylation domain-containing protein.
  
 0.768
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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