STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW36281.1Putative tricarboxylic transport membrane protein. (163 aa)    
Predicted Functional Partners:
SCW36262.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.922
SCW36304.1
TctA family transporter.
 
 
  0.892
SCW59611.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.819
SCW86097.1
Protein of unknown function.
  
     0.532
SCW85003.1
Uncharacterized protein involved in outer membrane biogenesis.
  
     0.475
SCW80641.1
Hypothetical protein.
 
    0.465
SCW80654.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.457
SCW90039.1
SGNH hydrolase-like domain-containing protein, acetyltransferase AlgX.
  
     0.451
SCW59705.1
Hypothetical protein.
 
    0.448
SCW82037.1
Putative tricarboxylic transport membrane protein.
 
 
  0.428
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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