STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW39674.1Pimeloyl-ACP methyl ester carboxylesterase. (250 aa)    
Predicted Functional Partners:
SCW93801.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 0.986
SCW93834.1
Amino acid adenylation domain-containing protein.
  
 0.973
SCW93796.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.849
SCW39607.1
Uncharacterized conserved protein, contains Zn-finger domain.
 
     0.841
SCW96643.1
Hypothetical protein.
  
     0.715
SCW30560.1
Flagellar export protein FliJ.
  
     0.705
SCW85119.1
Uncharacterized membrane protein.
  
     0.650
SCW78406.1
Invasion protein IalB, involved in pathogenesis.
  
     0.643
SCW60116.1
Hypothetical protein.
  
     0.636
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
   
  0.629
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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