STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW39884.1NifU homolog involved in Fe-S cluster formation. (150 aa)    
Predicted Functional Partners:
SCW92533.1
Cysteine desulfurase.
  
 0.999
SCW92555.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.993
SCW74534.1
Selenocysteine lyase/Cysteine desulfurase.
  
 0.992
SCW36562.1
Ferredoxin, 2Fe-2S.
  
 0.988
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.978
SCW62216.1
Hypothetical chaperone protein.
  
 
 0.967
SCW92544.1
Fe-S cluster assembly ATP-binding protein.
 
  
 0.961
SCW92576.1
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
  
  
 0.944
SCW95074.1
Propane monooxygenase reductase subunit.
  
 0.942
SCW86076.1
Ferredoxin-NADP reductase.
  
 0.941
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.