STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW42589.1Methanol dehydrogenase (cytochrome) large subunit apoprotein. (634 aa)    
Predicted Functional Partners:
SCW42647.1
Methanol dehydrogenase (cytochrome) small subunit; Catalyzes the oxidation of primary alcohols including methanol.
 
 
 0.996
SCW42607.1
mxaJ protein.
 
 
 0.966
SCW42626.1
Cytochrome cL apoprotein; Electron acceptor for MDH. Acts in methanol oxidation.
 
 
 0.958
SCW42781.1
mxaD protein.
 
  
  0.947
SCW42725.1
mxaC protein.
 
  
  0.943
SCW42761.1
mxaL protein.
 
  
  0.942
SCW42740.1
mxaK protein.
 
  
  0.938
SCW42708.1
mxaA protein.
 
  
  0.937
SCW91852.1
Quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein.
 
 
 0.829
SCW91924.1
Formaldehyde activating enzyme.
  
  
 0.817
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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