STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW44332.1Cache domain-containing protein. (150 aa)    
Predicted Functional Partners:
SCW91704.1
PAS domain S-box-containing protein.
    
 0.947
SCW68434.1
Signal transduction histidine kinase.
    
 0.921
SCW40015.1
PAS domain S-box-containing protein.
    
 0.911
SCW59872.1
Na+/proline symporter.
 
  
 0.874
SCW67831.1
PAS domain S-box-containing protein.
    
 0.832
SCW94550.1
Two-component system, chemotaxis family, sensor kinase CheA.
    
 0.809
SCW36706.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
  
  
 0.807
SCW36030.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase).
    
 0.784
SCW59541.1
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor.
    
 0.720
SCW30305.1
PAS domain S-box-containing protein.
  
 
 0.715
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.