STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW44450.1Peptide/nickel transport system substrate-binding protein. (504 aa)    
Predicted Functional Partners:
SCW44510.1
Peptide/nickel transport system permease protein.
 0.994
SCW44486.1
Peptide/nickel transport system permease protein.
 0.978
SCW44466.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.941
SCW68087.1
Peptide/nickel transport system permease protein.
 0.927
SCW81360.1
Peptide/nickel transport system permease protein.
 0.923
SCW81342.1
Peptide/nickel transport system permease protein.
 0.918
SCW68071.1
Peptide/nickel transport system permease protein.
 0.893
SCW68056.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.887
SCW68034.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.885
SCW44527.1
Proline iminopeptidase; Belongs to the peptidase S33 family.
 
     0.791
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.