STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW52718.1Beta-glucosidase. (483 aa)    
Predicted Functional Partners:
SCW52687.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.896
SCW59423.1
Alpha-glucosidase.
 
 
 0.858
SCW79757.1
TIGR02217 family protein.
   
   0.855
SCW79768.1
Phage conserved hypothetical protein BR0599.
   
   0.855
SCW79682.1
Phage conserved hypothetical protein, phiE125 gp8 family.
   
   0.854
SCW79695.1
Head-tail adaptor.
    
   0.853
SCW79706.1
Protein of unknown function.
    
   0.853
SCW79716.1
Phage major tail protein, TP901-1 family.
   
   0.853
SCW93519.1
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
  0.835
SCW94939.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
   
 
 0.787
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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