STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW54897.1Hypothetical protein. (165 aa)    
Predicted Functional Partners:
SCW54879.1
Choline dehydrogenase.
 
     0.929
SCW87614.1
Choline dehydrogenase.
  
     0.775
SCW54913.1
Multiple sugar transport system permease protein.
       0.773
SCW54928.1
Multiple sugar transport system permease protein.
       0.762
SCW87583.1
Predicted DNA-binding protein, contains Ribbon-helix-helix (RHH) domain.
  
     0.762
SCW54851.1
Adenine/guanine phosphoribosyltransferase.
       0.697
SCW96875.1
Predicted DNA-binding protein, contains Ribbon-helix-helix (RHH) domain.
  
     0.596
SCW74215.1
Choline dehydrogenase.
  
     0.563
SCW54946.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
 
     0.545
SCW87595.1
Lactoylglutathione lyase.
  
     0.514
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.