STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW55519.1Transcriptional regulator, GntR family. (230 aa)    
Predicted Functional Partners:
SCW29273.1
DNA-binding transcriptional regulator, GntR family.
  
     0.763
SCW90066.1
Transcriptional regulator, GntR family.
  
     0.705
SCW67496.1
DNA-binding transcriptional regulator, FadR family.
  
    0.679
SCW55500.1
malonyl-CoA decarboxylase.
 
    0.673
SCW55485.1
malonyl-CoA/methylmalonyl-CoA synthetase.
 
     0.647
SCW55469.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
     0.628
SCW42945.1
DNA-binding transcriptional regulator, FadR family.
  
    0.527
SCW78059.1
DNA-binding transcriptional regulator, FadR family.
  
    0.521
SCW55451.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.468
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.