STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW56218.1Type I secretion system ABC transporter, PrtD family. (563 aa)    
Predicted Functional Partners:
SCW56233.1
HlyD family secretion protein.
  
 0.950
pstB-2
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.898
pstB
Phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.878
SCW70628.1
HlyD family secretion protein.
  
 0.795
SCW67305.1
HlyD family secretion protein.
  
 0.793
SCW45649.1
HlyD family secretion protein.
  
 0.786
SCW56249.1
Hypothetical protein; Manually curated.
       0.773
SCW43795.1
Polar amino acid transport system ATP-binding protein.
 
      0.754
SCW80865.1
Sorbitol ABC transporter ATP-binding protein/mannitol ABC transporter ATP-binding protein.
 
     
0.702
SCW67467.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.685
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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